The detailed information of tRNA gene sequence


Sequence ID>WENV170455712
Genome IDCEVA01133173
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4
End posion on genome 80
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnggt
tRNA gene sequence 
CGGGGTGTGGCGCAGCCCGGAAGCGCACCTCCTTGGGGTGGAGGGGGTCGCAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
tcgtttcttg
Secondary structure (Cloverleaf model)
>WENV170455712	Pro	GGG
                   t      ACCA tcgtttcttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    C       C G C G       G C A G G     C
    C       | | | |                 T T
    G       G C G C
      G A A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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