The detailed information of tRNA gene sequence


Sequence ID>WENV170456073
Genome IDCEVA01171884
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 227
End posion on genome 304
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgtcgaacc
tRNA gene sequence 
AGCGGGTTGGAGTAGCCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGATCGTTCAA
ATCGATCACCCGCTACCA
Downstream region at tRNA end position 
acgcgaatct
Secondary structure (Cloverleaf model)
>WENV170456073	Met	CAT
                   c      ACCA acgcgaatct
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T A G C     A
    C C G A        G      | | | | |     A
  A         T G A G       G A T C G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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