The detailed information of tRNA gene sequence


Sequence ID>WENV170456621
Genome IDCEVA01219939
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1906
End posion on genome 1817
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcattacc
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTAGCGGGGAAACTCGC
TCCTGGGTTCGAATCCCAGTCCCTCCGCCA
Downstream region at tRNA end position 
ttgtacattc
Secondary structure (Cloverleaf model)
>WENV170456621	Ser	TGA
                   c      GCCA ttgtacattc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAGCGGGGAAACTCGCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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