The detailed information of tRNA gene sequence


Sequence ID>WENV170457295
Genome IDCEVA01349010
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 492
End posion on genome 583
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcatgcttg
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGACATAAGGGGTCCGTCTCGAAAACGGATAGGCGTGTTGAGCG
CCACGTGGGTTCGAATCCCACCCTCTCCGCCG
Downstream region at tRNA end position 
aagtttcttt
Secondary structure (Cloverleaf model)
>WENV170457295	Ser	CGA
                   g      GCCG aagtttcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        G      | | | | |     G
  G         G C C C       G T G G G     C
  A           | | |                 T T
  C         A G G G
    A T A          G     TAGGCGTGTTGAGCGCCAC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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