The detailed information of tRNA gene sequence


Sequence ID>WENV170457394
Genome IDCEVA01399665
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 105
End posion on genome 7
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttaaatacct
tRNA gene sequence 
GGAAGCGCTTCCTAGGCTGGTGCCGGGCCTGGACTTCAAATCCAGAGGAGGCTGTGGCAA
CACGGGCTCGGGGGGTTCGATTCCCCTGCGCTTCCGCCA
Downstream region at tRNA end position 
agtgacnnnn
Secondary structure (Cloverleaf model)
>WENV170457394	SeC(p)	TCA
                   t      GCCA agtgacnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    T     T C C C C     A
      C G G        T      + | | | |     G
    T       A T C C       G G G G G     C
    G         + | |                 T T
    G       C G G G
      T G C        C     AGGAGGCTGTGGCAACACGGGCTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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