The detailed information of tRNA gene sequence


Sequence ID>WENV170457658
Genome IDCEVA01490731
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1322
End posion on genome 1247
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acacttagtt
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGAAGAGCGCCTCAATGGCATTGAGGAGGTCGTCGGTTCGAGT
CCGATTGGGTCCACCA
Downstream region at tRNA end position 
ctagcgacta
Secondary structure (Cloverleaf model)
>WENV170457658	Ala	GGC
                   t      ACCA ctagcgacta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T A G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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