The detailed information of tRNA gene sequence


Sequence ID>WENV170457664
Genome IDCEVA01493372
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1148
End posion on genome 1246
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aggaaacgta
tRNA gene sequence 
GGGAGCGGATGGGAGCCTGGTGGCCTCCGCGGACTTCAAATCCGTAGCGGTGTAGCGAGA
GCTGCGCTGGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
cttcccaacc
Secondary structure (Cloverleaf model)
>WENV170457664	SeC(p)	TCA
                   a      GCCA cttcccaacc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C C G        T      | | | | |     G
    T       A G G G       G T G G G     C
    G         | + |                 T T
    G       C C T C
      T G G        C     AGCGGTGTAGCGAGAGCTGCGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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