The detailed information of tRNA gene sequence


Sequence ID>WENV170458234
Genome IDCEVB01052566
Search identical group
Phylum/Class[CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 288
End posion on genome 193
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccaaaaatat
tRNA gene sequence 
GGCGACGTCAGGGTAGCTGGTGCTCCTCGCGGTCTTCAAAACCGTTGTGTAGTTATAGAT
ACTACAGGTGGGTTCGATTCCCATCCGTCGCCGCTA
Downstream region at tRNA end position 
tggggctgac
Secondary structure (Cloverleaf model)
>WENV170458234	SeC	TCA
                   t      GCTA tggggctgac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C
                     T   C          T T
                    C     T A C C C     A
      C G A        A      + | | | |     G
    T       T G G G       G T G G G     C
    G         | | +                 T T
    G       T C C T
      T G C        C     TGTGTAGTTATAGATACTACAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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