The detailed information of tRNA gene sequence


Sequence ID>WENV170465412
Genome IDCEVD01507924
Search identical group
Phylum/Class[CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 719
End posion on genome 622
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcggttttat
tRNA gene sequence 
GGGAGTGGATGGGTCCCGGTGGGCCTTACGGACTTCAAATCCGTTGGCTCCGGCCCTTCG
GTCGGAGTGGTGGGTTCGACTCCCTCGCACTCCCGCCA
Downstream region at tRNA end position 
tttcatcaga
Secondary structure (Cloverleaf model)
>WENV170465412	SeC(p)	TCA
                   t      GCCA tttcatcaga
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       T G G G       G T G G G     C
    G       + | | +                 T T
    T       G C C T
      G G          T     TGGCTCCGGCCCTTCGGTCGGAGTG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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