The detailed information of tRNA gene sequence


Sequence ID>WENV170470330
Genome IDCEVF01243404
Search identical group
Phylum/Class[CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 594
End posion on genome 684
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacaacaaaA
tRNA gene sequence 
TTAGGTATTGCAGAGTATGGTTTAATGCGACATTTTGCTAAAATGTTAAATATTAAAATA
TTTCGCACGTTCAAATCGTGTTACCTAATTtt
Downstream region at tRNA end position 
attattggta
Secondary structure (Cloverleaf model)
>WENV170470330	Ser	GCT
                   A      TTtt attattggta
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G T G C     A
    A T G A        T      + | | | |     A
  T         G A C G       G C A C G     C
  G           | | |                 T T
  G         A T G C
    T T T A        G     TAAATATTAAAATATTTC
                    A - T
                    C - G
                    A - T
                    T - A
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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