The detailed information of tRNA gene sequence


Sequence ID>WENV170476236
Genome IDCEVI01088743
Search identical group
Phylum/Class[CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 204
End posion on genome 280
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttaattt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAAATCACTCATAATGATTAGGTCCCTGGTTCGAG
TCCAGGCGGGCCCACCG
Downstream region at tRNA end position 
acttttttga
Secondary structure (Cloverleaf model)
>WENV170476236	Met	CAT
                   t      ACCG acttttttga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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