The detailed information of tRNA gene sequence


Sequence ID>WENV170476255
Genome IDCEVI01091069
Search identical group
Phylum/Class[CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5706
End posion on genome 5633
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taagtatata
tRNA gene sequence 
TAAGAGTATAGTTTAATCGGTAAAATAGGAAGCTTCAACCTTCAAATTTTCAGTTCAAAT
CTGAATGCTCTTGAttt
Downstream region at tRNA end position 
ttaacgctac
Secondary structure (Cloverleaf model)
>WENV170476255	SeC	TCA
                   a      Attt ttaacgctac
                     T + G
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T A
                    T     A A G T C     A
      T A A        A      | | | | |     A
    C       T T T G       T T C A G     C
    G       | | | +                 T T
    G       A A A T
      T A          A     AATT
                    G   A
                    G - C
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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