The detailed information of tRNA gene sequence


Sequence ID>WENV170476805
Genome IDCEVI01214591
Search identical group
Phylum/Class[CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 230
End posion on genome 305
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtctggcat
tRNA gene sequence 
GGGGGTATAGCTCAGTGGTTAGAGCAGTCGGCTCATAACTGATTGGTCCTTGGTTCGAAC
CCAAGTACCCCCACCA
Downstream region at tRNA end position 
gacacgaacg
Secondary structure (Cloverleaf model)
>WENV170476805	Met	CAT
                   t      ACCA gacacgaacg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          C A
                    T     G A A C C     A
      T G A        A      | | | | |     G
    G       C T C G       C T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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