The detailed information of tRNA gene sequence


Sequence ID>WENV170477301
Genome IDCEVJ01057945
Search identical group
Phylum/Class[CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 562
End posion on genome 473
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cacgcgacgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCACCGCATTCGAAATGCGGCGTACGGGCGACCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttgcctgcct
Secondary structure (Cloverleaf model)
>WENV170477301	Ser	CGA
                   c      GCCA ttgcctgcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACGGGCGACCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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