The detailed information of tRNA gene sequence


Sequence ID>WENV170477904
Genome IDCEVJ01176692
Search identical group
Phylum/Class[CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 591
End posion on genome 499
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctagagcaat
tRNA gene sequence 
GGAGGTGAATGGAGTCTGGTGATTCCCCTGGTCTTCAAAACCAGTGAGTCGGTGAACCCA
GCTGGTGGGTTCGATTCCCATCCACCTCCGCCA
Downstream region at tRNA end position 
atcaagcaca
Secondary structure (Cloverleaf model)
>WENV170477904	SeC(p)	TCA
                   t      GCCA atcaagcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T A C C C     A
      T C T        T      + | | | |     G
    G       G A G G       G T G G G     C
    G       + | | |                 T T
    T       T T C C
      G A          C     TGAGTCGGTGAACCCAGCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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