The detailed information of tRNA gene sequence


Sequence ID>WENV170478235
Genome IDCEVK01026207
Search identical group
Phylum/Class[CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 471
End posion on genome 547
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtcttgtgt
tRNA gene sequence 
GGCCCGGTGGTGTAGCGGTTTAACATATCGGCCTGTCACGCCGAAGATCACGGGTTCAAA
TCCCGTCCGGGTCGCCA
Downstream region at tRNA end position 
ctcctcaggt
Secondary structure (Cloverleaf model)
>WENV170478235	Asp	GTC
                   t      GCCA ctcctcaggt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     A
    G       T G T G       A C G G G     C
    G       | | | +                 T T
    T       A C A T
      T T A        A     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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