The detailed information of tRNA gene sequence


Sequence ID>WENV170478265
Genome IDCEVK01029273
Search identical group
Phylum/Class[CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 407
End posion on genome 317
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgagatcc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGTTAATCGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gacatggcga
Secondary structure (Cloverleaf model)
>WENV170478265	Ser	GGA
                   c      GCCA gacatggcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGTTAATCGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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