The detailed information of tRNA gene sequence


Sequence ID>WENV170482068
Genome IDCEVM01004032
Search identical group
Phylum/Class[CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 177
End posion on genome 102
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccacttgtgt
tRNA gene sequence 
GGGGCTGTAGCTCATCTGGGAGAGCGCTTCAATGGCATTGAAGAGGTACGGGGTTCGAGT
CCCCGCAGCTCCACCA
Downstream region at tRNA end position 
ttcccctctg
Secondary structure (Cloverleaf model)
>WENV170482068	Ala	GGC
                   t      ACCA ttcccctctg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     G C C C C     A
      C T A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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