The detailed information of tRNA gene sequence


Sequence ID>WENV170483238
Genome IDCEVM01104230
Search identical group
Phylum/Class[CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 310
End posion on genome 384
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttgcagt
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtc
Downstream region at tRNA end position 
ttttggtctt
Secondary structure (Cloverleaf model)
>WENV170483238	Cys	GCA
                   t      TCtc ttttggtctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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