The detailed information of tRNA gene sequence


Sequence ID>WENV170483489
Genome IDCEVM01123076
Search identical group
Phylum/Class[CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1015
End posion on genome 1107
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtgcattcgt
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTTGAAGGAGCGCGCTTGGAAAGCGTGTGTAGGGGTGACCCTC
CTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttcttgtacc
Secondary structure (Cloverleaf model)
>WENV170483489	Pro	TGG
                   t      GCCA ttcttgtacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         + | |                 T T
    T       A G G A
      T G A        G     TGTAGGGGTGACCCTCCTACC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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