The detailed information of tRNA gene sequence


Sequence ID>WENV170490039
Genome IDCEVP01187931
Search identical group
Phylum/Class[CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 159
End posion on genome 66
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
accttaccga
tRNA gene sequence 
CGGAAGAGCGTCCGGCCCGGTGGTCGGCGCGGCCTTCAAAGCCGTTGAGGTGCGATTACG
TGCCTGGTGGGTTCGACTCCTACCTCTTCCGCCAa
Downstream region at tRNA end position 
caacccctat
Secondary structure (Cloverleaf model)
>WENV170490039	SeC	TCA
                   a      CCAa caacccctat
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T C
                    C     C A T C C     A
      C C G        G      | | + | |     G
    C       G C C T       G T G G G     C
    G       +   | +                 T T
    G       T C G G
      T G G        C     TGAGGTGCGATTACGTGCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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