The detailed information of tRNA gene sequence


Sequence ID>WENV170499336
Genome IDCEVT01147023
Search identical group
Phylum/Class[CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1120
End posion on genome 1030
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgacaaatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGTAACCCTGT
ATCGAGAGTTCGAATCTCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaatacaa
Secondary structure (Cloverleaf model)
>WENV170499336	Ser	GGA
                   c      GCCA ttaaatacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGTAACCCTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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