The detailed information of tRNA gene sequence


Sequence ID>WENV170501686
Genome IDCEVU01150786
Search identical group
Phylum/Class[CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 287
End posion on genome 360
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagtaatta
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGCACTCATAATGCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCAgta
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV170501686	Met	CAT
                   a      Agta tttttattta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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