The detailed information of tRNA gene sequence


Sequence ID>WENV170501754
Genome IDCEVU01158089
Search identical group
Phylum/Class[CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 380
End posion on genome 284
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctatcaatat
tRNA gene sequence 
GGGAGTGGATAGTGTCCGGTGGCGCTCGCGGTCTTCAAAACCGTTGTGAGGCAACGTCGT
TGTCTCAGGTGGGTTCGACCCCCACGCATTCCCGCCA
Downstream region at tRNA end position 
ctttgatttt
Secondary structure (Cloverleaf model)
>WENV170501754	SeC(p)	TCA
                   t      GCCA ctttgatttt
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   G          C C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T G A       G T G G G     C
    G       | + | |                 T T
    T       C G C T
      G G          C     TGTGAGGCAACGTCGTTGTCTCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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