The detailed information of tRNA gene sequence


Sequence ID>WENV170502206
Genome IDCEVU01276127
Search identical group
Phylum/Class[CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 477
End posion on genome 552
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccaaattta
tRNA gene sequence 
GGTCCTCTAGCTCAATTGGTAGAGCCAACCGCTCATAACGGTTTGGTTGTCGGTTCGAGT
CCGGCGGGGACCACCA
Downstream region at tRNA end position 
actcttcctt
Secondary structure (Cloverleaf model)
>WENV170502206	Met	CAT
                   a      ACCA actcttcctt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     C G G C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     TGGTT
                    A - T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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