The detailed information of tRNA gene sequence


Sequence ID>WENV170502245
Genome IDCEVU01300286
Search identical group
Phylum/Class[CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 198
End posion on genome 102
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gatgtttttt
tRNA gene sequence 
GGAAGAGGATCGCACCCCGGTTGGGGCGCTCGGACTTCAAATCCGGTGAGGGGCGTTAGA
CGTGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
ataaatttct
Secondary structure (Cloverleaf model)
>WENV170502245	SeC(p)	TCA
                   t      GCCA ataaatttct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    A     C A C C C     A
    C C C C        T      | | | | |     G
  G         A C G C       G T G G G     C
  G           | | |                 T T
  T         G G C G
    T G G          C     TGAGGGGCGTTAGACGTGCCTG
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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