The detailed information of tRNA gene sequence


Sequence ID>WENV170504973
Genome IDCEVW01017809
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 178
End posion on genome 101
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatgtctttt
tRNA gene sequence 
CGGGGCGTCGCGTAGCTTGGTTATCGTATCTGTTTTGGGTATAGAAATTCGTAGGTTCAA
ATCCTGCCGCCCCGACCA
Downstream region at tRNA end position 
aaaaatttat
Secondary structure (Cloverleaf model)
>WENV170504973	Pro	TGG
                   t      ACCA aaaaatttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
    T C G A        C      | + | | |     A
  T         T G C G       G T A G G     C
  G           | | +                 T T
  G         T C G T
    T T A          A     AATTC
                    T - A
                    C - G
                    T - A
                    G + T
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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