The detailed information of tRNA gene sequence


Sequence ID>WENV170506010
Genome IDCEVW01126128
Search identical group
Phylum/Class[CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 518
End posion on genome 594
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aatataacat
tRNA gene sequence 
GTCCTTGTAGTTCAATCGGATAGAACAAGTGCCTTCTAAGCACTAGGTTAGTGGTTCGAG
TCCACTCAGGGACGCCA
Downstream region at tRNA end position 
ataaggtgat
Secondary structure (Cloverleaf model)
>WENV170506010	Arg	TCT
                   t      GCCA ataaggtgat
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      T A A        A      | | | | |     G
    C       C T T G       A G T G G     C
    G       | | | |                 T T
    G       G A A C
      A T A        A     AGGTT
                    A - T
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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