The detailed information of tRNA gene sequence


Sequence ID>WENV170507043
Genome IDCEVX01012556
Search identical group
Phylum/Class[CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1081
End posion on genome 1009
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatatctaaa
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGTAGGTTTCCAAAACCTGATGTCGTGGGTTCAAGT
CCTACAGGGCGTGgtt
Downstream region at tRNA end position 
ttatctcttg
Secondary structure (Cloverleaf model)
>WENV170507043	Trp	CCA
                   a      Ggtt ttatctcttg
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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