The detailed information of tRNA gene sequence


Sequence ID>WENV170507949
Genome IDCEVX01110546
Search identical group
Phylum/Class[CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 222
End posion on genome 128
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataaataat
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGGAGTAACCC
TCTGTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aataaatcag
Secondary structure (Cloverleaf model)
>WENV170507949	Ser	GCT
                   t      GCCA aataaatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGGAGTAACCCTCTGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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