The detailed information of tRNA gene sequence


Sequence ID>WENV170510106
Genome IDCEVY01105914
Search identical group
Phylum/Class[CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 501
End posion on genome 426
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctagaaataT
tRNA gene sequence 
AGCGGGATAGAGCAGTCTGGTAGCTTGTAAGGCTCATAATCTTAAGGTCACAGGTTCAAA
TCCTGTTCCCGCCAAat
Downstream region at tRNA end position 
ttttcgagat
Secondary structure (Cloverleaf model)
>WENV170510106	Met	CAT
                   T      AAat ttttcgagat
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | +                 T T
    G       G C T T
      G T A        G     AGGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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