The detailed information of tRNA gene sequence


Sequence ID>WENV170513593
Genome IDCEWA01015082
Search identical group
Phylum/Class[CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1003
End posion on genome 1078
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaaagatct
tRNA gene sequence 
AGGGGTATAGTGTTAATGGCTAGCACGACAGTCTCCAAAACTGTAAGTCTGGGTTCAAAT
CCTAGTACCTCTGCCA
Downstream region at tRNA end position 
aaaaccttcc
Secondary structure (Cloverleaf model)
>WENV170513593	Trp	CCA
                   t      GCCA aaaaccttcc
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G A T C C     A
      A A T        A      | | + | |     A
    T       T G T G       C T G G G     C
    G       + | | |                 T T
    G       G C A C
      C T A        G     AAGT
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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