The detailed information of tRNA gene sequence


Sequence ID>WENV170514013
Genome IDCEWA01047924
Search identical group
Phylum/Class[CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3214
End posion on genome 3141
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaattaatta
tRNA gene sequence 
GGGGTAGTGGTCTAGTGGTATGATGCTTGCTTTGGGTGCAAGAGATTGGGGGTTCGATTC
CCTCCTACCCCCCAc
Downstream region at tRNA end position 
ttcttaaaat
Secondary structure (Cloverleaf model)
>WENV170514013	Pro	TGG
                   a      CCAc ttcttaaaat
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     T C T G       G G G G G     C
      G       | | +                 T T
      G     T G A T
        T A        G     AGATT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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