The detailed information of tRNA gene sequence


Sequence ID>WENV170514371
Genome IDCEWA01080718
Search identical group
Phylum/Class[CEWA] marine metagenome genome assembly TARA_038_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8619
End posion on genome 8711
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgtttttgt
tRNA gene sequence 
AGTGGGATGGCAGAGTCTGGCTGATTGCGACGGTCTTGAAAACCGTTTGGCGTTTGTAGC
GTCACGGGGGTTCGAATCCCTCTCCCACTGCCA
Downstream region at tRNA end position 
attttttgta
Secondary structure (Cloverleaf model)
>WENV170514371	Ser	TGA
                   t      GCCA attttttgta
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        G     TTGGCGTTTGTAGCGTCAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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