The detailed information of tRNA gene sequence


Sequence ID>WENV170516202
Genome IDCEWB01089860
Search identical group
Phylum/Class[CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1782
End posion on genome 1710
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcctaata
tRNA gene sequence 
AAGCTTGTAGTTTAACGGTTAAAACTTGAAGCTCATAACTTTAAAATTAAAGGTTCAATT
CCTTTCAAGCTTAtac
Downstream region at tRNA end position 
taaaattgtt
Secondary structure (Cloverleaf model)
>WENV170516202	Met	CAT
                   a      Atac taaaattgtt
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T T
                    T     T T T C C     A
      C A A        A      | | | | |     A
    G       T T T G       A A A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          T     AAATT
                    T - A
                    G + T
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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