The detailed information of tRNA gene sequence


Sequence ID>WENV170516865
Genome IDCEWC01022196
Search identical group
Phylum/Class[CEWC] marine metagenome genome assembly TARA_036_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 423
End posion on genome 335
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaaatactT
tRNA gene sequence 
GGAGAGTCAATCCGATAGGTGACGGAACCGCTCTTGAAAAGCGTCGAGGTGTTAAAGCCC
TTGGGGGTTCGATTCCCCCACTCTCCGTtt
Downstream region at tRNA end position 
gtatagcatt
Secondary structure (Cloverleaf model)
>WENV170516865	Ser	TGA
                   T      GTtt gtatagcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    C     C C C C C     A
      T A G        A      | | | | |     G
    A       C C T A       G G G G G     C
    G         | +                   T T
    G       C G G A
      T G A        A     CGAGGTGTTAAAGCCCTT
                    C   T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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