The detailed information of tRNA gene sequence


Sequence ID>WENV170517233
Genome IDCEWE01020718
Search identical group
Phylum/Class[CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 278
End posion on genome 374
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
actcgtcggt
tRNA gene sequence 
GGAAGTGCTCCGGTCCTGGTGGGTCGCGCGGTCTTCAAAACCGTTGTGGGGCGTTTATGG
CGTCCCGGGGGGGTTCGATTCCCCTGCATTTCCGCCA
Downstream region at tRNA end position 
tccacaccct
Secondary structure (Cloverleaf model)
>WENV170517233	SeC(p)	TCA
                   t      GCCA tccacaccct
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C
                     C - G          T T
                    T     T C C C C     A
      T C C        C      + | | | |     G
    G       T G G C       G G G G G     C
    G       + + | |                 T T
    T       G T C G
      G G          C     TGTGGGGCGTTTATGGCGTCCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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