The detailed information of tRNA gene sequence


Sequence ID>WENV170518873
Genome IDCEWE01172824
Search identical group
Phylum/Class[CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 270
End posion on genome 181
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacatttac
tRNA gene sequence 
GGAAAGGTGGCTGAGCGGCTTAAAGCACTTCCCTGCTAAGGAAGAGTACGGGTAACTGTA
CCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
ggtaaatatc
Secondary structure (Cloverleaf model)
>WENV170518873	Ser	GCT
                   c      GCCA ggtaaatatc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T T A        A     AGTACGGGTAACTGTACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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