The detailed information of tRNA gene sequence


Sequence ID>WENV170520159
Genome IDCEWE01368170
Search identical group
Phylum/Class[CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 242
End posion on genome 152
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctaatatca
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCGCTCGCTTGGAAAGCGAGTGTGCGGTAGTACCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aggttgtcac
Secondary structure (Cloverleaf model)
>WENV170520159	Ser	GGA
                   a      GCCA aggttgtcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTGCGGTAGTACCGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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