The detailed information of tRNA gene sequence


Sequence ID>WENV170520706
Genome IDCEWF01000712
Search identical group
Phylum/Class[CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3834
End posion on genome 3739
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caatcgtgat
tRNA gene sequence 
GGAAGGCAATCGCACCCGGTGGTGCGGCCGGGCTTCAACCCCGGTTGGGGGCGGCAGCCG
CTCCCGGGTGGGTTCGACTCCCACTGCCTTCCGCCA
Downstream region at tRNA end position 
tttcgcctgc
Secondary structure (Cloverleaf model)
>WENV170520706	SeC	TCA
                   t      GCCA tttcgcctgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       A C G C       G T G G G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TTGGGGGCGGCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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