The detailed information of tRNA gene sequence


Sequence ID>WENV170521117
Genome IDCEWF01084217
Search identical group
Phylum/Class[CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 368
End posion on genome 443
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaaaatagt
tRNA gene sequence 
GGAGCTGTAGTGTAGTGGTCCAGCATCGCGGGCTTTCGACCCGTGGACAGGGGTTCAAAT
CCCCTCAGCTCTGCCA
Downstream region at tRNA end position 
ttgtgcaggg
Secondary structure (Cloverleaf model)
>WENV170521117	Glu	TTC
                   t      GCCA ttgtgcaggg
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    G       T G T G       A G G G G     C
    G       + | | +                 T T
    T       G C A T
      C C A        C     GGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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