The detailed information of tRNA gene sequence


Sequence ID>WENV170521260
Genome IDCEWF01142687
Search identical group
Phylum/Class[CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 865
End posion on genome 790
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctaccaaac
tRNA gene sequence 
GCGCTTATAGCTCAGTGGTTAGAGCATCCGACTCATAATCGGCAGGTCGCTGGTTCAAAT
CCAGCTGGGCGCACCA
Downstream region at tRNA end position 
atttgttaca
Secondary structure (Cloverleaf model)
>WENV170521260	Met	CAT
                   c      ACCA atttgttaca
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T + G
                     A - T          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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