The detailed information of tRNA gene sequence


Sequence ID>WENV170521304
Genome IDCEWF01149916
Search identical group
Phylum/Class[CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1915
End posion on genome 1840
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagcgggtaa
tRNA gene sequence 
GGGTCATTAGTTCAATTGGTAGAACCACCAGCTCATAACTGGTTAGTTACAGGTTCGAGT
CCTGTATGACCCACTA
Downstream region at tRNA end position 
attaactctt
Secondary structure (Cloverleaf model)
>WENV170521304	Met	CAT
                   a      ACTA attaactctt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T G
                    T     T G T C C     A
      T A A        A      | | | | |     G
    T       C T T G       A C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          C     TAGTT
                    A - T
                    C - G
                    C - G
                    A - T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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