The detailed information of tRNA gene sequence


Sequence ID>WENV170522187
Genome IDCEWG01075856
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 961
End posion on genome 885
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccatttca
tRNA gene sequence 
GGGCCTTTAGTTCAGTTGGTTAGAGCATCCCGCTCATAACGGGGTAGTCGTCGGTTCGAG
TCCGACAGGGCCCACCA
Downstream region at tRNA end position 
tttaaaaata
Secondary structure (Cloverleaf model)
>WENV170522187	Met	CAT
                   a      ACCA tttaaaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T T G       G T C G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     TAGTC
                    T + G
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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