The detailed information of tRNA gene sequence


Sequence ID>WENV170522900
Genome IDCEWG01143245
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 513
End posion on genome 604
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaataaa
tRNA gene sequence 
GGAGAGGTGGCAGAGCTTGGTTTAATGTATCGCACTCGAAATGCGACGTGGATTAAAATT
CACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtaatacctt
Secondary structure (Cloverleaf model)
>WENV170522900	Ser	CGA
                   a      GCCA gtaatacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        G      | | | | |     G
  T         G A C G       G C G G G     C
  G           | | +                 T T
  G         A T G T
    T T T A        A     CGTGGATTAAAATTCACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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