The detailed information of tRNA gene sequence


Sequence ID>WENV170523843
Genome IDCEWG01284091
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 570
End posion on genome 481
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnacttaata
tRNA gene sequence 
GGAGGATGGGCAGGACGGTAATGCAGCGGATTGCTAATCCGTACTACGTGTATAAGCGTA
GAGTGGGTTCGACTCCCACATCCTCCGCCA
Downstream region at tRNA end position 
tttttgtgtg
Secondary structure (Cloverleaf model)
>WENV170523843	Ser	GCT
                   a      GCCA tttttgtgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    G     C A C C C     A
        A G        G      | | | | |     G
      C     G A C G       G T G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     ACTACGTGTATAAGCGTAGA
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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