The detailed information of tRNA gene sequence


Sequence ID>WENV170523942
Genome IDCEWG01337629
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 613
End posion on genome 524
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaatgacta
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTTTAAGGTGCACGCTTGGAAAGCGTGTGTGGAGGTAACTCCA
CCGCGGGTTCAAATCCCGCTCTCTCCGCAA
Downstream region at tRNA end position 
tacatatgaa
Secondary structure (Cloverleaf model)
>WENV170523942	Ser	GGA
                   a      GCAA tacatatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C T       G C G G G     C
    G         + |                   T T
    T       A G G T
      T T A        G     TGTGGAGGTAACTCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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