The detailed information of tRNA gene sequence


Sequence ID>WENV170524104
Genome IDCEWG01393467
Search identical group
Phylum/Class[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 44
End posion on genome 117
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atataatttT
tRNA gene sequence 
AGCGGCTTGGCGCAGTGGAAGCGTGTTTGGCTCATAACCAGAAGGACCTAGGATCGAAAC
CTAGAGTCGCTATgt
Downstream region at tRNA end position 
gtgtgttgta
Secondary structure (Cloverleaf model)
>WENV170524104	Met	CAT
                   T      ATgt gtgtgttgta
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     T - A          A A
                    T     G A T C C     A
        G A        G      | | | | |     G
      T     C G C G       C T A G G     C
      G     | | | +                 A T
      G     G C G T
        A A        G     AGGAC
                    T - A
                    T + G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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