The detailed information of tRNA gene sequence


Sequence ID>WENV170525011
Genome IDCEWH01071592
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 868
End posion on genome 792
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaagtttagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGTTTTGGGTACAGGGGGTCGCAAGTTCGAA
TCTTGCCGTCCCGACCA
Downstream region at tRNA end position 
cttcacttgt
Secondary structure (Cloverleaf model)
>WENV170525011	Pro	TGG
                   t      ACCA cttcacttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T T C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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