The detailed information of tRNA gene sequence


Sequence ID>WENV170525074
Genome IDCEWH01080382
Search identical group
Phylum/Class[CEWH] marine metagenome genome assembly TARA_109_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 248
End posion on genome 154
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ctaattttta
tRNA gene sequence 
GGTCCTGTAGTTTAACGGTAAAACACCCGGCTTATACTCGGCAAAGTCTCCAGATTTAGA
GAGCGATGGGGGTTCGAATCCCCCCGGGACCACCA
Downstream region at tRNA end position 
actttatttt
Secondary structure (Cloverleaf model)
>WENV170525074	Ile	TAT
                   a      ACCA actttatttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C C C C     A
        A A        A      | | | | |     G
      C     T T T G       G G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     AAAGTCTCCAGATTTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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